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Dear monocle team,
I am trying to extract some l2 cells from the data, and I tried the examples given in the documents.
When I try to plot the tsne in "use case 4", the "cholinergic cells", I found…
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I was hoping that we could be provided with more control over the color scales in the UMAP/tSNE plots.
First, being able to display the scales after log transformation. Second, to set max and min v…
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pca's first pc can only explain 16% variance. maybe tsne is better?
https://www.analyticsvidhya.com/blog/2017/01/t-sne-implementation-r-python/
https://cran.r-project.org/web/packages/tsne/tsne…
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When I try and follow the windows instructions in the readme I get the following error:
cl.exe /nologo /O2 /EHsc /D "_CRT_SECURE_NO_DEPRECATE" /D "USEOMP" /openmp tsne.obj sptree.obj -Fewindows\bh_ts…
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**What is your question?**
like question #3360
[my dataset](https://drive.google.com/file/d/1P3UcuCrO6FU_NKv4E59goDzqQP36CxHD/view?usp=sharing)
# Steps/Code to reproduce
```python
import numpy as…
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Part of Issue #2071
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Wondering if is possible to use threads. I was applying tsne to a dataset of size(50K,10) and it is really slow.
Can you give advice to handle big datasets?
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I am by no means an expert on t-SNE, and I think your blogpost https://distill.pub/2016/misread-tsne/ is quite helpful for beginners, like myself.
Now that I have installed R-package Rtsne (https:/…
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- optionally output dot file of graph?
- tsne/other cluster visualization
- ref @mr-eyes work with kSpider/dbretina
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https://github.com/Lv-291/wasm-bhtsne