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The zscore is defined as (x - mean) / standard deviation (https://en.wikipedia.org/wiki/Standard_score), yet in z_score in clustermap, it is defined as:
z_scored = (z_scored - z_scored.mean()) / z_sc…
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SpaceDock Log:
```
2015-11-15 19:18:43.326 [INFO ] - agentId: d31c319955504b5ba162a51a0026d693
2015-11-15 19:18:43.336 [INFO ] - mcUrl: https://mission.basespace.illumina.com
2015-11-15 19:18:43.337 …
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Hi,
I am trying to retrieve the index of samples after clustering using a the clustermap function. Can the order of the rows be obtained after clustering? If not, this would be a useful feature to h…
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/cluster/project8/vyp/pontikos/People/JessicaGardner/output/cluster/R/deseq_JessicaGardner_X.out
```
WARNING: unknown option '--keep.sex=FALSE'
WARNING: unknown option '--support.frame=input-trimmed…
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I'm trying to plot a _seaborn_ _clustermap_ (it doesn't work with the _heatmap_ too) with the following, no NaNs admitted:
``` python
import numpy as np
import pandas as pd
import seaborn…
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```
Purpose of code changes on this branch:
Update the clustering package to have a unified interface for clustering
implementations, with several new implementations added.
When reviewing my code ch…
-
```
Purpose of code changes on this branch:
Update the clustering package to have a unified interface for clustering
implementations, with several new implementations added.
When reviewing my code c…
-
As per @dtenenba 's email :
> ...on moscato2 as pkgbuild, went to e:\packagebuilder\workers\jobs\kimod_20151211194650
>
> Went to R-libs and set R_LIBS_USER to the current directory.
> Went back up…
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Hello,
I just ran into an issue with `vmax` + `row_colors` in `clustermap`. See the following:
With:
```
import pandas as pd
import seaborn as sb
flights = sb.load_dataset("flights")
flights_rect =…
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There are two more things from the old query section that are missing in the new one:
1. associations (conditional probability for two search terms, both displayed in amcat as a network graph and as a…