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Hi,
I've been trying to reuse the example code, MPNNLSTM, GCLSTM, and GConvLSTM with my own dataset. My MSE errors are around .2 but the models do not return correct target values. When I run the exa…
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## 🐛 Bug
Right now, applying HeteroGraphConv to a graph while only having created modules for a subset of the graphs etypes causes a KeyError to be raised.
For the torch model the corresponding lin…
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Hello,
I got this error when I was trying to run /ogb/examples/lsc/mag240m
```
$ python gnn.py --device=0 --model=graphsage
Namespace(batch_size=1024, device='0', dropout=0.5, epochs=100, evalua…
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I tried creating a conda environment from your `env.yml` file but get a failure:
```
> conda env create -f env.yml
Collecting package metadata (repodata.json): done
Solving environment: failed
…
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Saw this in the readme:
> BIONIC assumes all networks are undirected and enforces this in its preprocessing step.
Unfortunate, considering that regulatory networks are directed.
Is there any…
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Hi @yyou1996,
I wonder how to speed up the pretraining on chem data. How long did you use to pretrain one epoch on it? Which gpu version did you use? I think the speed bottleneck is the CPU or io. …
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## ❓ Questions & Help
I wanted to implement some graph deep learning algorithm and I was confused about which one should I use? [DGL](https://github.com/dmlc/dgl) or Pytorch Geometric? I specifical…
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It is fairly new method but with a big application potential.
"Graph neural networks (GNNs) are connectionist models that capture the dependence of graphs via message passing between the nodes of g…
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Given that so much has happened with Flux, I think it might be a good time to take a step back and reevaluate what the goals of Flux.jl and the FluxML project are. Since the maintainers that are runni…