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I'll need a function (e.g. "_get_source_space_vertices()") that outputs the indices to source space vertices for the Freesurfer vertices in labels (labels.vertices). For example, I'd like to use these…
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With the BrainTime dataset did you QC all time-points in the longitudinal stream?
njudd updated
4 years ago
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```python
In [6]: aphasia
Out[6]:
Semiology Term Gif Parcellations pt #s
0 NaN 32.0 0.0
1 NaN 33.0 2.0
2 NaN …
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# 1. catROIs_...xml vs catROI_...xml ?
Execution of the following segmentation batch:
```
matlabbatch{1}.spm.tools.cat.estwrite.data = {[NiiFile ',1']};
matlabbatch{1}.spm.tools.cat.estw…
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In a previous issue, it was mentioned that the order in cortex_parcel_network_assignments.mat corresponded to the parcel order in Glasser parcellation, in which all the left parcels correspond to the …
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There seems to be a mismatch between the order of the Glasser parcels (all left hemisphere regions first - i.e. the first 180 correspond to left regions, the last 180 correspond to right regions) and …
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Hello,
Starting somewhat recently (maybe in the last 6 months) we've noticed that when borders files are displayed in our scene files, it substantially slows down the loading time in wb_view (e.g. fo…
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Hey `brainsmash` developers! Thanks for an exciting toolbox :raised_hands: Looking forward to using it in some of my work. I had a few thoughts after taking a closer look at the docs + code that might…
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This library does not return the color tables for Parcellation maps for [reference datasets](https://balsa.wustl.edu/). The cifti file reports `CIFTI_INDEX_TYPE_LABELS` and the Matlab code dutifully r…
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Hello,
When I am trying to run :
`easy_lausanne --subject_id fsaverage --target_volume /usr/local/freesurfer/subjects/fsaverage/mri/orig.mgz --target_type bold --output_dir /home/alex/MRI`
…