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Group phenotypes by trait ontology/enivornment ontology
Display tree for the ontologies
timeu updated
8 years ago
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Should cover planning monsters, animals, mythological creatures, and other living things that aren't necessarily "characters".
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This has to do with yam traits not having trait and variable option as the case are for other traits Ontologies.
aco46 updated
8 years ago
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_From @seymourmegan on August 31, 2015 17:44_
We are unable to look up EO or PDO terms by ID # in the TO,EO, PSO Dev browser.
http://palea.cgrb.oregonstate.edu/trait_ontology/cgi-bin/trait_amigo/go.c…
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So far, I am loading the following:
uberon/basic
cl-basic
pato
environment_ontology
plant_ontology
ncbitaxon
trait
I intend to also load GO and ChEBI.
Are there others we need? Maybe plant disease?…
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There seems to have been some confusion with this repo
It was originally created to satisfy this request
https://github.com/Planteome/plant-trait-ontology/issues/2
We need a planteome.owl importer f…
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_From @cooperl09 on May 12, 2015 17:35_
Comment from Chris M:
planteome needs an importer module. This will simplify configuration for amigo and any other tools that consume planteome ontologies.
Th…
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We are unable to look up EO or PDO terms by ID # in the TO,EO, PSO Dev browser.
http://palea.cgrb.oregonstate.edu/trait_ontology/cgi-bin/trait_amigo/go.cgi
For example:
When I search for PDO:0000176,…
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PO has one term:
[PO:0009049](http://purl.obolibrary.org/obo/PO_0009049) ! inflorescence [SYNONYM: "Asteraceae floret" (narrow)] [SYNONYM: "capitulum" (narrow)] [SYNONYM: "catkin" (narrow)] [SYNONYM:…
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Check if it has a variable_of relationship.
Will query variables from materialized view.