-
**[Casey Trimm](https://github.com/c-trimm)** 8 months ago
Allow editors to set a default image for clades. This can be used to determine what image shows up in the cladogram when someone clicks on t…
i2xzy updated
5 years ago
-
I have noticed that there is a difference in the correlation values produced by the `Foreground + Sisterlist -> foreground2TreeClades -> tree2PathsClades -> correlateWithBinaryPhenotype` pipeline and …
-
**Describe the bug**
When using the `dnConstrainedTopology` distribution with nonclock trees (i.e., when the `treeDistribution` argument if of type `Distribution__BranchLengthTree`), a backbone const…
-
My project will analyze _Salmonella enterica_ subsp. _enterica_ serovar _Enteritidis_ (_S. enteritidis_) genomes from a variety of international locations. I think the paper given below would be a goo…
-
this came up as followup todos during the bounding box experiments.
across the clades, evaluate the following different approaches:
- source photo squashed into 299x299
- source photo square center c…
-
Hi there!
I'm using TreeViewer to simplify a very large (700+OTU) tree by collapsing clades down by species, but it becomes very cumbersome to try to undo any of these changes longer after-the-fact. …
-
Minor bug: https://nextstrain.org/flu/seasonal/vic/na/2y is a redirect (302) to https://nextstrain.org/seasonal-flu/vic/na/2y (we have quite a few redirects within nextstrain these days)
When usin…
-
### Context
The colon (`:`) is reserved as separator for the dual tree display, so we explicitly [split all paths by colon](https://github.com/nextstrain/nextstrain.org/blob/221c67e5dad919edea65787bc…
-
Hello,
I'm running into an error with v 2.5.5: "ERROR: Species tree inference failed / local variable 'speciesTree' referenced before assignment"
I think this might be a similar error to one pre…
emdtr updated
3 months ago
-
**[Casey Trimm](https://github.com/c-trimm)** 5 months ago
Create a way for a user to update their personal information. We may want to also add the option to upload an avatar. Some of this info may …
i2xzy updated
5 years ago