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Hi! I am trying to decrypt some files and I have a secret key for that that I've set as passphrase:
`export C4GH_PASSPHRASE= decryption key they sent me via email`
I am trying to generate a secr…
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#### Are you using the latest version of [samtools](https://github.com/samtools/samtools/releases/latest) and [HTSlib](https://github.com/samtools/htslib/releases/latest)? If not, please specify.
(ru…
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I wonder if samtools `view` (*also other commands*) automatically use reference file path in the header when reading CRAM files without `--reference` arg? I tried to view a CRAM with a simple command …
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I personally manually created an edge case which will lead to false duplication be marked
please see the test data
[test.data.gz](https://github.com/samtools/samtools/files/6217134/test.data.gz)
…
wulj2 updated
2 years ago
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#### Are you using the latest version of [samtools](https://github.com/samtools/samtools/releases/latest) and [HTSlib](https://github.com/samtools/htslib/releases/latest)?
yes
If not, please speci…
ghuls updated
2 years ago
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#### Are you using the latest version of [samtools](https://github.com/samtools/samtools/releases/latest) and [HTSlib](https://github.com/samtools/htslib/releases/latest)? If not, please specify.
(ru…
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One test fails when CI runs on PR#45 with suggested maven-jar-plugin version bump:
https://github.com/uio-bmi/crypt4gh/runs/4798705086?check_suite_focus=true#step:2:52
seems to be a documented k…
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**Link to the page of interest**
https://rdmkit.elixir-europe.org/human_data.html
https://rdmkit.elixir-europe.org/sensitive_data.html
**Describe what you would change to the page**
One of this …
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## Description
Hey again, folks... I'm attempting to load some pretrained SparkNLP pipelines in my GitHub Actions workflow as part of my unit tests. They were passing before, but started …
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Library [crypt4gh](https://pypi.org/project/crypt4gh/) can generate and use keys based on different algorithms. One of them is `scrypt`, which depends on very specific features from OpenSSL used to co…