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The logical parameter "add" of pco-based gam and pco-based FDboost determines wether an additive constant should be added to distance matrix for euclidean representation. So I want to check the infl…
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**Describe the bug**
Setting init_barycenter in dtw_barycenter_averaging_subgradient generates an AttributeError exception. Not specifying init_barycenter, no exception is raised
**To Reproduce*…
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Hey there,
I've got the following problem: I'm trying to identify the optimal number of clusters for my data. Therefore I run the KMeans (DTW) algorithm with different values for "n_clusters", whil…
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File "dtw.py" should be refactored --- maybe renaming it to e.g. "aligner.py"? --- to support different algorithms in the future. For example, triangular global alignment kernels or variations on the …
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## Description
I'm wondering if there's any appetite for adding support for time-series imagery to the existing [RAG](https://scikit-image.org/docs/stable/api/skimage.future.graph.html#skimage.futu…
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[conda-forge](https://conda-forge.org) recently started a migration for PyPy 3.8 and PyPy 3.9: https://github.com/conda-forge/dtaidistance-feedstock/pull/11
The builds seems fine, however the impor…
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What we have to do:
- **metrics**: Manhattan, euclidean, dtw, compression-based: maybe show the pairwise distance distributions
- **approximation**: SAX, PAA
- **clustering**:
* KMeans (with eu…
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Hi Sam,
Thanks for developing uncalled4 (much needed!). I am trying to obtain reference level statistics (KS comparison between two samples processed with uncalled4 align and I am running into some…
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Hello,
I'm trying to use this awesome library as I use MarketMatch in R with the following [dataset](https://docs.google.com/spreadsheets/d/1sdNjqc9AqSHgmPJGQ5W1yzUuYjimZ3DjDHy4zmJYOOQ/edit?usp=shar…
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StackOverflow demonstration of Dynamic Time Warping using NumPy and RPy2:
http://stackoverflow.com/questions/5695388/dynamic-time-warping-in-python
http://stackoverflow.com/a/5766202
```
import nump…