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Hi Christophe! Thank you for making this tool available.
I have two questions about it: Did you calculate the Grantham distance for the loci that Pierini F & Lenz TL did not analyze (or did not inclu…
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when i run :
```
$ ./sc_hla_count_linux -b outs/possorted_genome_bam.bam -c outs/filtered_feature_bc_matrix/barcodes.tsv.gz -o ./outs -d HLA/IPDIMGT/download
```
report it …
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_Issue [HLA-1112](https://jira.stsci.edu/browse/HLA-1112) was created on JIRA by [Jennifer Mack](https://jira.stsci.edu/secure/ViewProfile.jspa?name=mack):_
Comment from Rick White in team_burgundy…
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Converts HLA system into a Feats & Abilities System whereby characters select HLAs from Level 1.
## **New Caster HLAs**
- **Bonus (Level 1-9th) Spell**: must be able to cast spell of said leve…
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_Issue [HLA-1295](https://jira.stsci.edu/browse/HLA-1295) was created on JIRA by [Rick White](https://jira.stsci.edu/secure/ViewProfile.jspa?name=rlw):_
There is an error in the logic that rejects …
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Hi all,
I run
```
user% ./NERVE.sh -epp False -vir True -rz True -p1 UP000000625 -wd /Users/ab/Applications/NERVE/docker/nerve/workdir/ecoli -g n -m True
```
and got :
```
wrote config …
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Hi:
When i run the HLA_frequencies.R to get Geographic maps of HLA data ,there are different errors before and after two runs. Can you give some advice?
[error1:]
Error in code line:
hla.is…
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I have no issue running `extract` and `genotype` as part of my Snakemake pipeline. I am now testing adding `quant` to it.
My testing environment is a simple mamba env with only `arcasHLA` and its r…
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Hi,
I am analyzing my SNPs from hg19 using your tool. But I got errors when I was running the bmarkergenerator (and no output).
Here is the error I got.
#///////////////////////////
Error:…
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Hi, can SpecHLA type DRB3 and DRB5 as kourami? Thanks