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Steps needed on idr-next for NGFF upgrade.
NB: current checklist is for actions on idr-testing (newly redeployed on 21st May 2024)
Detailed workflow is at https://github.com/IDR/mkngff_upgrade_scr…
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Comparing the import times of ome.zarr file with its original counterpart (an ome.tiff file).
``multifile-Z1.ome.tiff`` from public ome-tiff samples. Both samples user-8, see https://latest-ci.o…
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https://anaconda.org/ome/bftools created with 6.3.1 for the community meeting.
- [ ] review openjdk choice
- [x] activate travis or GitHub actions
- [x] unify travis files via imports (seealso…
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- [ ] Save Project_Name.csv, Dataset_Name.csv and Dataset_Name_Image_List.csv at the top-level of Project_Name folder
- [ ] Use save "Image-List.csv" with name "Dataset_Name_Image_List.csv"
- [ ] Us…
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idr0013-neumann-mitocheck
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Issue was raised on forum thread https://forum.image.sc/t/ome-zarr-import-to-omero-failure-response-on-import/82067/3
The stack trace is as below (with ZarrReader 0.3.0):
```
java.lang.ClassCastE…
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There's a request to be able to have cockpit automatically perform some image processing after it is done with the acquisition. This happens in softworx which can be configured to automatically deconv…
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At least for the "ansible-example-omero-onenode" playbook and under Ubuntu 20.04, the omero-server and omero-web users are created but without a usable bash environment. Would be nice to have those ac…
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## Background
For a long time the IDR has recommended the use of a [custom connection method](https://github.com/IDR/idr-py/blob/v0.4.0/idr/connections.py#L42) instead of the standard OMERO.py clie…