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hey team ohdsi
i have a problem builing constraints after inserting inserting vocabulary (from athena)
cdm version 5.4.1
1. creating tables - dll
2. inserting vocabulary rxnorm from athena …
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It dawned on me that after running an OHDSI Cohort Expression, that oftentimes, we would just like to get the patient cohort directly from the output of that expression execution. Usually, these cohor…
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**Describe the bug**
Context - We are limited to external authentication to generate a scan report from a direct connection to Snowflake Cloud or SQL Server through Citrix - both use Okta.
In test o…
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1. `SpatialEpi` [(CRAN Link)](https://cran.r-project.org/web/packages/SpatialEpi/index.html)
- Statistical tests (i.e., spatial clusters by Besag-Newell's and Kulldorff's methods)
- Taking d…
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This task expect Trino (query engine) to be containerized and called in container platform.
In this phase, Trino should be able to interact directly with OMOP CDM database of PostgreSQL of #2 by shar…
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I have created a new OHDSI Docker container for the data build tool (dbt), to support the OHDSI community in using dbt for OMOP CDM conversion ETL.
The new GitHub repo is here:
https://github.com/…
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This task expect PostgreSQL (database) to be containerized and called in container platform.
In this phase, PostgreSQL should be able to spined as a OMOP CDM foundation, the container have to inclu…
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https://github.com/OHDSI/Atlas
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This is just and idea I'd like some feedback on to see if it is worth implementing.
The OMOP CDM has a lot of date columns. Sqlite does not have a date type and thus also does not support date man…