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Dear Joelle
We're using Regenie to perform standard gene-level analyses (burden, skato etc) from population-scale WES data.
We'd like to begin exploring testing entire pathways using the same me…
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I would kindly like to inquire about obtaining the genuine testing dataset for SHINE. It appears that the number of samples in the provided testing dataset exceeds the quantity mentioned in the publis…
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Hi, thanks for your great work. I am going to reproduce this project in my own computer, but it seems that I do not have enought information of 1. version of packages used in this project, like for to…
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I'm writing a script that calls from two (potentially) different gcsfuse-mounted sources. In my testbed, they both happen to be on the same bucket, but in reality, they won't be. So, I tried to --moun…
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gkiar updated
5 years ago
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Hi,
Thank you very much for this wonderful package. I find it very helpful for visualizing GWAS results.
I noticed that the `annotate` feature only annotates one locus when two signals are very…
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Hi @eugenegardner just wondering what the consequences of not applying any filter for the ALT/ALT genotypes would be. Very likely including false positive calls? Also do you have any idea why is this …
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Hi, congratulation on the great work! I would like to know whether it is possible to apply SUSIE-inf on individual data, since the original SUSIE has both individual and summary version avaliable. Wou…
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Hi there,
Our group is very much interested in your method. We wish to run your codes provided in your ukbb_validation. However, we noticed the dependent file is not provided. Could you please upl…
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Hi, I was wondering why is age*sex, age*sex^2 included as covariates. Is age and sex not enough to account as the covariates?