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Hi, developers
Thanks for your efforts to make it work in python. I have a practical question. If your package allows users to save the parameters used in the previous registration, then use it in …
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Dear experts and developers,
I am dealing with a [template](https://github.com/Jinglei-Lv/Tissue_Unbiased_FOD_Tractogram_Template) that was generated with HCP subjects with the `antsMultivariateT…
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Some 3D affine registration tests don't pass reliably so I have commented them out. I spent some time looking into this and my suspicion is that when optimizing full affine transforms the mismatch obj…
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Rotate timeslices to correct orientation.
https://matplotlib.org/2.0.0/examples/api/demo_affine_image.html
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Dear community,
I would like to perform a TBM on the results of the antsLongitudinalCorticalThickness.sh pipeline.
I have two acquisition time points for each subject t1 and t2.
I combined th…
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We are trying to build an template from ~35 mid-gestation mouse fetuses. modality is microCT (with iodine contrast). Some fetuses at this stage may have a torsion of the head with respect to the axis…
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### Background
Most (if not all) 3D renderers use spatial transformation matrices. For example, here is the documentation of [three.js' Matrix4](https://threejs.org/docs/#api/en/math/Matrix4) type wh…
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I've created an improved [Robust matching using RANSAC](http://scikit-image.org/docs/dev/auto_examples/plot_matching.html) example which warps and overlays the robust estimate on the image. This highl…
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not sure if I'm missing something or if there is a bug here
```
# f: image with shape (200, 200, 200)
# aff: nonzero affine
w = ants.transform_from_displacement_field(
ants.from_nump…
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Hi, I am new to the forum so my apologies if I repeat something from previous posts. I have read all threads but could not find a solution to my problem.
On PC, widnows10, I am trying to install CMTK…