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something, MUMmer, bedtools, primer design
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Hello,
Thanks again for putting together RBPNet. I've been using some of the pre-trained models from the paper as a basis for transfer learning within a number of new models to some success. When …
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Hello,
I am working on TBI in killifish using bioinformatics approach.
I want to investigate killifish clusters and it’s subclusters as it is not very well studied. I want to discover the cell typ…
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I'm making sure the pybedtools tests work with bedtools v2.29.2, and I'm seeing the following issue. It's been a while since I've updated the tests, so this may not be something that just popped up.
…
daler updated
2 years ago
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Added here at Ryan Layer's request.
I put a post on bedtools-discuss (https://groups.google.com/forum/#!topic/bedtools-discuss/t6E74mCQb-E), suggesting that you support adding and retrieving heade…
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Hi,
I am trying to run CNV-ClinViewer locally through RStudio Server, installed on Ubuntu 20.04 LTS. During the installation of all dependencies, the installation of `bedtoolsr` fails because RStud…
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Hi!
I recently ran into a new error with bedtools v2.29.2. I started using a new system for an analysis pipeline I had built on a different system under bedtools v2.25.0 and I am getting the erro…
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Columns 9, 11, and 12 can and typically do have commas.
https://bedtools.readthedocs.io/en/latest/content/general-usage.html
arq5x updated
2 years ago
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Where the fasta header from bedtools output is
```
>1:3069197-3069296(+)
```
the one from the subsequent step (adding poly(A) tails) is
```
>1:3069197-30692
```
Investigate module sequ…
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https://groups.google.com/forum/#!topic/bedtools-discuss/TetrJYsJHX4
arq5x updated
6 months ago