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Currently not working:
Command line:
/usr/lib/jvm/java-7-openjdk-amd64/jre/bin/java -splash:resources/conf/denovogui-splash.png -Xms128M -Xmx4096M -cp /home/biodocker/bin/DeNovoGUI-1.5.2/DeNovoGUI-1…
prvst updated
8 years ago
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As soon as docker images are a reliable way to use OpenMS, we should mention it in the documentation and on the website.
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The /data/ folder set up as `WORKDIR` do not provide the biodocker user proper working permissions. I did some tests with the DIA_Umpire program and the software could not write the outputs on /data/.…
prvst updated
8 years ago
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http://www.nextflow.io/blog/2014/using-docker-in-hpc-cluster.html
Based on Java/Groovy
Videos:
http://www.nextflow.io/presentations.html
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Should we create folders for specific fields (proteomics, genomics, metabolomics, etc) containing symlinks to the related tools to facilitate search?
Positives:
- Easier to find tools
- Easier to f…
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May I have the permission to convert and deposit your dockerfile (with small modifications) on the biodocker repository?
regards
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May I have the permission to convert and deposit your dockerfile (with small modifications) on the biodocker repository?
regards
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For non-trivial pull requests, a simple majority of the commiters have to give +1 for it to be accepted.
/cc @BioDocker/contributors
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After a chat with Yasset we decided to purchase biodocker.org. Though we could get some hosting for the website by now seems easier to have the main site hosted in github pages.
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Currently the containers repository is 300Mb since it contains 'traces' of the old binaries.
O propose to move containers to containers2 (for historical reasons) and create a new containers reposito…