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From our colleagues at RCIGM, we have several example use cases related to genetic diseases. The goal is to take info about the variants and the phenotypes, and to propose candidate therapies. For t…
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As a developer I want to include the `epmc` into the `literature` step based on @d0choa's comment [here](https://github.com/opentargets/platform-etl-backend/pull/310#issuecomment-1737122898): "They a…
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There's a well funded assumption that the new incrementally released EPMC data does not cover all publications. We need to identify examples that we are certain that were not covered in the release so…
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Hi Gnomad Team
in https://gnomad.broadinstitute.org/downloads#v2-variant-cooccurrence
the link for microsoft https://datasetgnomad.blob.core.windows.net/dataset/release/2.1.1/ht/exomes_phased_co…
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Hi,
In the `An introduction to the ASCETIC R package`, the last step is that extraction of evolutionary signatures significantly associated to prognosis. I want to know how to get the `evolutionary_s…
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Is it possible to disregard punctuation marks and interjections (e.g. in GERMAPARL2) when calculating coocurrence statistics?
E.g.:
```r
merkel_only_speech
subset(protocol_date == "2013-09-03"…
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openjournals/joss-reviews/issues/6366
Hello. I am able to install the `fqar` package both via github and CRAN. I believe I am using the package downloaded from CRAN (they both have the same version…
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### Description
With scipy 1.10.1, the item similarity matrix is a dense matrix
```
print(type(model.item_similarity))
print(type(model.user_affinity))
print(type(model.item_similarity) == np.n…
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### Preliminary checklist
- [X] I have read the [README](https://github.com/uazo/cromite/blob/master/README.md).
- [X] I have searched the existing issues for my problem. This is a new ticket, NOT a …
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Issue: When submitting a query to ARAX that includes a message with a knowledge graph, ARAX responds with a 400 error with the following data:
```
{
"detail": "{...} is not valid under any o…