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Store contents into a separate database and ingest daily via cronjob (or pipeline tool of choice).
DB - Google BigQuery
Pipeline - cron on a compute instance / cloud function running daily
Mak…
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### Notice
There are many files need to be copied from biowulf to S3 in many different folders.
### Detail
Root Path in S3:
lix33/COVID19/UpstreamAnalysis/PostPrimaryRun/Data/10_11_2021/lo…
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This paper monitored shedding of viral RNA and infectious virus and characterized the immune response kinetics of the first five patients quarantined in Geneva, Switzerland.
Data from the Challeng…
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#ライブラリ読み込み
import pandas as pd
import numpy as np
%matplotlib inline
import matplotlib.pyplot as plt
import japanize_matplotlib
#csv取り込み
covid_data = pd.read_csv("https://stopcovid19.metro.to…
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Some places to start looking include:
- [Colorado Dept. of Public Health Covid data](https://covid19.colorado.gov/data): Lots of different datasets link out from this page or other CDPHE pages, in…
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The Johns Hopkins Coronavirus Resource Center will begin providing **U.S. state-level antigen testing** data from publicly reported sources on **Friday April, 12 2021**.
The new data will be incorpor…
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The Johns Hopkins Coronavirus Resource Center will begin providing U.S. state testing data from publicly reported sources, a service that replaces the COVID Tracking Project’s year-long collection eff…
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The CDC publishes data relating to COVID prevalence in wastewater:
https://covid.cdc.gov/covid-data-tracker/#wastewater-surveillance
This seems like it might lead to a much better way to estimat…
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Jenkins job result: FAILURE
Stage: Tidy CSV
[View full output](https://ci.floop.org.uk/job/GSS_data/job/COVID-19/job/PHS-Weekly-COVID-19-Statistical-Data-in-Scotland/29/)
Blocks #172
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I've created a super simple model for a table in my BigQuery database but the generated query from Cube throws a syntax error.
Here is the generated query:
`SELECT
DATETIME_TRUNC(DATETIME('co…