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In [`0cae7d2`](https://github.com/CERIT-SC/uptime/commit/0cae7d28a86c64341ea72cb6ec3f677eb3f269fc
), Workflow Execution Service K8s -- WES (https://wes-prod.cloud.e-infra.cz/ga4gh/wes/v1/ui/) was **do…
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**Is your feature request related to a problem? Please describe.**
`dockstore workflow wes status` reports the run status of a launched workflow, and `dockstore workflow wes status --verbose` returns …
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- https://github.com/eflows4hpc
- https://eflows4hpc.eu/
When browsing in the Uber car last night, it looks like one of the repositories contains some Go code to handle running, listing, and cance…
kinow updated
2 years ago
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**Describe the bug**
This PR introduces testing the Dockstore CLI's WES functionality against a Toil WES server: https://github.com/dockstore/dockstore-cli/pull/121. It seems that when requesting the …
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**Is your feature request related to a problem? Please describe.**
The Dockstore CLI supports 4 of the 6 standard AWS WES endpoints (https://ga4gh.github.io/workflow-execution-service-schemas/docs/#ta…
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In [`ae06a4c`](https://github.com/CERIT-SC/uptime/commit/ae06a4c65c96fd6039172909ca4c87ef59d19f8f
), Workflow Execution Service K8s -- WES (https://wes-prod.cloud.e-infra.cz/ga4gh/wes/v1/ui/) was **do…
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**Describe the bug**
To launch a workflow with WES from the CLI, you need to specify `--entry` (and --json?), but the help message just says `[parameters]`. Compare to workflow launch, where the para…
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**Is your feature request related to a problem? Please describe.**
To support both AWS and non-AWS credential methods, the CLI needs some minor refactoring to credential passing. This ticket will allo…
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From Denis:
I'd also like see a step-by-step tutorial along the lines of https://docs.dockstore.org/docs/publisher-tutorials/aws-batch/ which details how to get an Arvados key and a few screenshots of…
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Based on testing and feedback from Dockstore engineers potentially refactor and enhance the Dockstore CLI WES implementation
Is authorization handled properly?
Is it general enough for the endpoints u…