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Hi, I just installed mountainlab-js through conda and am trying out your algorithm but I keep getting the following error
RUNNING: ml-run-process ephys.bandpass_filter --inputs timeseries:/home/bl2…
bl202 updated
6 years ago
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The more I think about it, the more I realise that the CI python matrix is too aggressive. It enforces NEP29 on downstream packages, who _might_ want to actually be able to test with previous MDAnalys…
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Hello Magland,
I tried to sort one of the file (final mda file: 26G), 32 channels of 2 hours recording, there's an error as bellow. I doubled if it is because the file is too big. When I sort part …
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## Expected behavior ##
`universe.load_new(XTC, format=XTCReader, sub=universe.atoms.indices)` should result in a universe with a working trajectory.
Context:
I want to reload a trajectory wi…
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I'm pretty new to using `AnalysisBase` to write my own custom analysis classes, and I found it confusing that `frames` and `times` are handled differently in different classes.
Using the `NewAnalys…
edisj updated
2 months ago
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This is an upstream issue, but probably should be documented whilst the MDA parser has this current behaviour.
## Expected
Passing a PDB to propka or propkatraj should give the same predicted pk…
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### Expected behaviour
successfully import pmda.density.DensityAnalysis
### Actual behaviour
Error, cant import density in pmda. (MDA edition = 2.0.0)
### Code to reproduce the behaviour
``…
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Today I watched this behavior. Inside git repository:
```
[18.Nov 19:59:37] --- [~/github/Qpsmtpd-Plugin-Router] ---
% perl -Ilib -MQpsmtpd::Plugin::Router::Deliver::MDA -e0
fatal: No names found,…
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Hi @jipeifeng,
I am trying to run the metaSort using metaSPAdes assembled contigs and I am using the CONCOCT bins (from the same metagenome) as a MDA scaffolds. I am trying to use this tool on the mo…