-
John Sexton observes that a molecular species in contact with a DNA backbone is often used to show binding into a complex in a diagram. We should consider whether SBOL Visual can be extended to allow …
-
I am a new user
I am using the web interface to produce the PQR AND APBS files, for visualization in VMD.
I am visualizing an SH2 domain binding to a phosphorylated tyrosine within a peptide. File i…
-
In the latest version of http://purl.obolibrary.org/obo/go/snapshot/extensions/go-plus.json (which claims to be derived from http://purl.obolibrary.org/obo/go/releases/2017-10-25/extensions/go-plus.ow…
-
Hello,
GO:0097617 annealing activity and GO:0008301 DNA binding, bending are types of 'binding', but they should probably have a 'true' molecular activity parent (see also #16742). I propose to c…
-
based on this very recent paper , I will remove transcription associations from pol5 and update to ribosome processing by ISS
Reference: Braun CM, et al. (2020) Pol5 is required for recycling of sm…
-
Currently, ECO:0000096: Electrophoretic Mobility Shift Assay Evidence is a direct child term of ECO: 0000002: Direct Assay Evidence. The UMBC ECO team, however, has noticed that EMSA would be more acc…
-
currently
molecular adaptor activity
--GO:0030533 triplet codon-amino acid adaptor activity | is_a
--GO:0030674 protein binding, bridging
----GO:0043495 protein membrane adaptor | is_…
-
Using the GSEABase package in R is an easy way to map a list of GO terms to GOslims. However, I don't see a way to view which of the provided GO terms gets mapped to each of the GOslims.
What I _re…
kubu4 updated
4 years ago
-
the parsed content from the PDF is presented 2x in the editor https://poster.jellypbc.com/posts/injectable-biodegradable-chitosan-alginate-3d-porous-gel-scaffold-for-mrna-vaccine-delivery
pdf: http…
-
Hello,
pdbfixer version : latest version on github
openmm version : omnia-devel git_revision `36b6caa67e5f485023ec12d40e12f1700e19f618`
If a mmCIF with both ATOMs and HETATMs is parsed and fixe…