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related bids-examples issue for qMRI: https://github.com/bids-standard/bids-examples/issues/227
cc @agahkarakuzu @gilles86
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Commit: 71012eb588933e0a2fe55a6078927e5a91d7a92e
I launched a nextflow, but I don't know where the output is supposed to be located. Nothing that seems like output processed files was created on my…
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## Description
I added automatic spinal cord segmentations that were manually QC-ed on the branch `sb/add_auto_sc_seg` to the derivatives of `datasets/spine-generic-processed` .
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I'm working on getting some [BEP-001 example datasets](https://osf.io/k4bs5/) in shape prior to the spec release. As I have questions I'll post them here. Some of them may require spec clarification, …
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BEP001 (#508) introduces the idea of a “grouped scan collection” with respect to certain suffixes. In a recent call with @agahkarakuzu and @emdupre, we talked about the idea of divorcing the idea of g…
tsalo updated
3 years ago
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> Would it be possible to separate out the new entities into their own PRs? It seems like the new entities (`part`, `fa`, `inv`, and `mt`) are fairly self-contained and could be reviewed in distinct c…
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@pchholak Actually there's a mistake in the example in the quickstart guide: `BIDSPath` doesn't accept a `bids_root` parameter – this should be `root`.
_Originally posted by @hoechenberger in https…
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to address [this comment](https://github.com/neuropoly/spinalcordtoolbox/pull/1672#discussion_r180408021):
> zougloub on Apr 10 Member
> Could mtsat be in a folder that may contain other "similar…
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I am dealing with thought, if not extend [extract_normative_metrics.sh](https://github.com/sct-pipeline/normative-metrics/blob/master/scripts/extract_normative_metrics.sh) script to allow extraction o…
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#508 proposes a number of new suffixes meant for qMRI workflows. These suffixes all require multiple files, and in some cases some of those files may be equivalent to existing suffixes. For example, o…
tsalo updated
4 years ago