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Thank you for your outstanding work!
While running the PTPC code, I encountered an issue regarding a missing file named 'val_spline_path_400cm.json'. Others like "fcos3d_t2c_boxes.json". We donot k…
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I've tried to build a custom extension with a function that could take a name of an index or column as a parameter and do some work on it. After some time I realized, that I need to somehow obtain an …
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Hello:
Could you please help me.
Initially I used kb ref and count, in kb-python 0.27.3, as described here:
https://www.kallistobus.tools/tutorials/kb_velocity/python/kb_velocity/
and ever…
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**Describe the issue**
Hi, I'm unable to create a Kallisto index. When running the kb ref command (python 3.10.13 and kb 0.27.3) all files files are generated with the exception of the index file. Wh…
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Hi,
Thank you for providing this amazing tool!
I am trying to integrate 20 samples, for a total of 85,000 cells.
I am following the "Performing integration on datasets normalized with SCTransform…
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Hi team KB,
We are trying to use **kb count** with a new **10x Visium** dataset (https://www.10xgenomics.com/resources/datasets/visium-cytassist-mouse-embryo-11-mm-capture-area-ffpe-2-standard) whi…
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I try to use *perfmon_addEventSet* to monitor a single event. As I did not manage to make it work while being able to monitor two or more events, I tried with likwid-perfctr.
Similarly, likwid-perf…
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**Describe the bug**
Zero Energy except for the first core
**To Reproduce**
* LIKWID command:
in slurm script: likwid-mpirun -np 4 -g ENERGY ./$exe input
* LIKWID version:
likwid/5.2.2
…
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Here, I found a question, please ask everyone, is Error: kallisto index file not found index.idx_cdna.
Detailed description:
kb count --h5ad -i index.idx_cdna,index.idx_intron.0,index.idx_intron.1…
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**Describe the bug**
The number of PUs do not match the actual number of PUs in the last NUMA region due to the offset caused by inactive PUs. Included the actual layout at the end of the issue, but …