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hi!
I'm using cwltool and i'm missing a feature to supress the listing of output products. When a pipeline has a lot of output products the console gets filled up with data which is quite pointless…
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https://github.com/common-workflow-language/cwl-v1.2/blob/main/cwl-runner.cwl#L56
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Hi everybody,
First of all I would like to congratulate you all for the amazing work you
are doing with the CWL. It really seems a great idea to try to standardize
practices which we are actually r…
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- [x] demonstrate re-usable custom types https://github.com/common-workflow-language/common-workflow-language/issues/438
- [ ] demonstrate use of scicrunch.org to find IRIs for SoftwareRequirement ht…
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Here's how I see the scope of repo readme:
- links to tool descriptions
- operating as a module, similar to https://github.com/malariagen/binder
Any other ideas @alimanfoo @hardingnj ?
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Extend collections in a direction compatible with CWL support some day and that can improve Galaxy until then.
## Support Hierarchical Inputs to Tools and Workflows
Comment from @jxtx - "I was t…
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Hello, I am Michael R. Crusoe, one of the co-founders of the Common Workflow Language project, its Community Engineer, and a former sysadmin/SRE.
I really like this project's ethos!
You may find…
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Hello,
I had a quick chat with Peter about it in Dublin and if I got this right then he was inviting me to write this (delayed) issue.
In my experience, the abstraction to workflows is fine whenever…
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The spec of [`LoadListingEnum`](https://www.commonwl.org/v1.2/Workflow.html#LoadListingEnum) used in [`LoadListingRequirement`](https://www.commonwl.org/v1.2/Workflow.html#LoadListingRequirement) says…
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Dear nipype developers,
I am using nipype and I was wondering how 2.0 is progressing. I am addressing this here, because I could not find a better way, so I hope that is fine.
According to the…