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The pip-[installable](https://pypi.org/project/delphi-epidata/) `delphi-epidata` [python client](https://github.com/cmu-delphi/delphi-epidata/blob/dev/src/client/delphi_epidata.py) has matured in the …
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1. What was the goal?
2. How it conducted?
3. Which kind of infra?
4. What dataset?
5. what scale (number of machines)?
6. How many times repeated?
7. What statistical methods were applied?
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1. data (what's in the cloud)
2. statistical theory and methods
3. scalable algorithm implementations
4. scientific pipelines (infrastructure & dataset specific progress)
1. ndstore
1. ndvi…
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I have just started exploring use of DMRcate for DMR detection but have concerns about the approaches dmrcate offers for ranking DMRs. DMRcate offers Fisher's combination, Stouffer's combination, and …
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We aim to implement a system that leverages distillation and quantization to create a "child" neural network by combining parameters from two "parent" neural networks. The child network should inherit…
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I plan to work on the tomography algorithm series with the high performance capability. Doga's TomoPy has GridRec with multithreading. But iterative methods like SIRT, SART and statistical methods lik…
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There is some kind of substring parsing that I believe is causing unintended behavior. I checked the source for the various substring getting methods and possibly using itertools.chain is causing an i…
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We will want a script that can run (ideally automatically, via CI) and take all of the model_output files for a given week, and build an ensemble for them.
The script could live in the `src` folder…
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- Add the problem/experiments done in the papers so that we can do benchmarking.
- Implement some of the mating techniques; note that some adaption will have to be done to get it working on our ezCGP …
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Every file in Git repo has a number of commits related to it. Let's call it its volatility: File Volatility by Commits (FVC).
Then, we can calculate the position of this volatility for a particula…