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# Error at the PlasmidID step : gff_to_bed.sh
Hi
I am trying to run viral recon pipeline with assembly enabled, and has been encountering an error at the PlasmidID step. it would be very help…
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This is an example of code I wrote to generate a volcano plot from a .xls file containing CRISPR screen results analyzed by casTLE:
```R
library(tidyverse)
library(readxl)
library(ggrepel)
# …
raecv updated
2 years ago
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https://mp.weixin.qq.com/s/8R_y_4SqaJc_d-VNGKKM6A
ixxmu updated
2 years ago
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Hi MAUDE coders,
I wonder if the links to the tutorials could be updated, I am interested to test your method in FACS sorted CRISPR screens.
Thanks,
Martha
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## 🚀 Feature
The precision is only calculated for the selected Quantile (top 1%, top 5% etc..) of every class.
### Motivation
Im working on ML Classifiers for CRISPR/Cas9 screens and we screen …
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Dear Dr. Gonçalves,
I really like your Crispy paper, and I am trying to use Cripsy gene copy number ratio to correct our in-house CRISPR screen data.
I have downloaded CCLE copy number segment …
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https://mp.weixin.qq.com/s/qhro-3gMQSnBj3aStbS1Hg
ixxmu updated
3 years ago
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https://mp.weixin.qq.com/s/X56emlAPmmldjQhspGjYLw
ixxmu updated
2 years ago
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Hello @labgem and @merenlab (@meren),
I've been using both PPAnGGOLiN and Anvio pangenomic pipelines and really loving both tools. I've used both tools independently with Prokka annotated .gff file…
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Hi,
Thanks for the work on this tool! I'm helping a collaborator design guide RNAs for a CRISPR screen in mouse, and so far it's been really useful. However, I'm having an issue when trying to desi…