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For a voxelwise WB, the display of results seems to threshold the non-parametric p-value images when an FDR or an FWER correction is used (see `xCon(Ic).VspmFDRP` and `xCon(Ic).VspmFWEP` in the code b…
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Hi @spisakt
I testing pTFCE on some simulated data of the LESYMAP package. I am a bit unsure what to do with the output. Looks like the $Z output is an unthresholded map, I though I need to use $…
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Hi, great toolbox. Thanks for making it available. I've been working through the tutorials and it seems that the function: be_ept_tfce_diff is not part of the toolbox. Any chance I could get a copy?
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Refer to https://github.com/rordenlab/niimath#compilation
> Assuming you have a C compiler installed, you can compile the software by running the terminal command make from the projects folder.
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Arguably, TFCE with default parameters is better than "regular" cluster-based permutation tests and "default" thresholds. Maybe we could allow `threshold='tfce'` to make it easier for users.
We could…
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::SwE v.1.2.0
::SPM12
In Classic parametric SwE, explicit masking with a nifti image works if included in the SwE design, e.g.
`matlabbatch{1}.swe.smodel.masking.em = fullfile(masks_dir, 'gray_…
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Use for issues related to the new implementation of TFCE (PR #48, Issue #15)
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Hi Mark,
thanks for your code. Just a quick thought, in matlab_tfce_ttest_independent.m line 42:
truestat = (mean(imgs1,4)-mean(imgs2,4))./sqrt(var(imgs1,0,4)/nsub1+var(imgs2,0,4)/nsub1);
sho…
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Request from Mary Heitzeg's group at the University of Michigan