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Dear vcflib authors,
I find the program very useful. I successfully (without any error or warning) make the package in my Fedora 20 system using the commands:
```
git clone --recursive https://git…
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I am trying to merge two vcfstats files so that I can generate multi-sample plots, but am getting an error "Whoops, no such dst sample: B1-36490". My code is as follows:
bcftools stats B1-36489_S1.ge…
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Encountered an error in `plot-vcfstats` as compiled in #1033 (with LD_LIBRARY_PATH set). Precompiled release version 1.9 works correctly with script:
```
# variables
infile="clinotator.ambry.dbSNP1…
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The format of plot-vcfstats is `plot-vcfstats [OPTIONS] file.vchk […]`. If I don't specify `-p` I get an error.
```
Expected -p parameter.
at /usr/local/bcftools/1.9/bin/plot-vcfstats line 99
`…
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Trying to compile bcftools-1.9 on a RedHat shared system (I am not sudo).
```
echo $LD_LIBRARY_PATH
/my_home/lib/gsl-2.5/lib:/my_home/lib/zlib-1.2.11/lib:/my_home/lib
cd bcftools-1.9
./config…
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Add a command flag ```-b | --batch``` that will only output the final results, which should be valid JSON
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Building 0.11.0 on OS X with htslib1.4 leads to missing symbols when linking libcsamtools.so:
~~~~
gcc -L/sw/lib -L/sw/lib/python2.7/config -lpython2.7 -L/sw/lib -L/sw/lib -MD -I/sw/include build/te…
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When following the installation instructions for bcftools 1.9, I ran the following command
`./configure --enable-perl-filters --enable-libgsl --prefix=/config/binaries/bcftools/1.9`
The director…
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i use the `make` to build from source code of bcftools(v1.8) on a mac air, but i got several errors:
###
filter.c:53:8: warning: type specifier missing, defaults to 'int'
[-Wimplicit-int]
…
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Hi,
I am getting an error for the plot-vcfstats command. I am using the output of 'bcftools stats' command ('test.vcf.gz.stats') as the input file for 'plot-vcfstats', and am running bcftools v1.8.…