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Some participants have phenotypes that contains no useful information, but are still displayed.
![image.png](https://images.zenhubusercontent.com/5c50c605d33612569216f90c/3b8cdb47-75c3-4405-a735-7e73…
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For Aim I, @sergeitarasov and @uyedaj need:
An entity with good data coverage in phenoscape (e.g. dorsal fin) and all of the raw phenotypes and taxa.
We then need the raw phenotypes made into a s…
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This is really more of an owlsim / scigraph issue but manifesting [here](https://monarchinitiative.org/analyze/phenotypes/?input_items=HP%3A0002067+HP%3A0002322+HP%3A0000726&mode=search&target_species…
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Hi,
In step 2 there's usage of a file:
plink2 ... --keep ~/Documents/biobank/ukb_phenotypes/indiv_filtered_v2.txt
However, the closest thing I can see for that file is at step 3 where the fil…
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Issue:
Line with allele 1700003F12Rik tm1.1(KOMP)Vlcg is shown here to have both:
https://www.mousephenotype.org/data/genes/MGI:1922730
- hom preweaning lethality, incomplete penetrance
- hom prewea…
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https://github.com/obophenotype/upheno-dev
We often have a problem that phenotype terms are in Human Phenotype Ontology or Mammalian Phenotype Ontology with no rhyme or reason.
Example: MP has "…
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Hello,
I’m using PHIPO for describing phenotypes correlated with SARS-CoV-2 mutations. I’ve run across a few (4-5) cases where a phenotype I’m looking for doesn’t exist in PHIPO yet, but can be fou…
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Hi there,
We came across an issue when trying to run GWAS for multiple phenotypes at once using Regenie 2.2.4 and is hoping you could help us troubleshoot.
When we ran the program, it gave an er…
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need to add non-matching phenotypes to the api function call for getSimilarModels.
@cmungall can you comment on what you think the json should look like? because the current blob is a bunch of tripl…
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It would be really useful to see the overlapping phenotypes for orthologs on the orthologs tab on the gene pages. this would probably depend on #351, and would be distinct from the grid view of #325.…