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Problem: Often times, Spain reports Monkeypox case counts at the country-level, without more granular detail. This makes it a challenge to disentangle suspected, confirmed, and discarded cases, specif…
Mougk updated
2 years ago
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On https://raw.githubusercontent.com/globaldothealth/monkeypox/main/archives/2022-06-10%2021%3A02%3A21.741210.csv
fails with
```
Error in `mutate()`:
! Problem while computing `bin_index = age_b…
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I am currently using the default topics file. However, more than week ago, I added lately unknown hepatitis topic to the file. When I try to see the topic on the dashboard, it shows no data available.…
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I downloaded the docker image nextstrain/nextclade:2.0.0-alpha.3-debian, but I can't download the latest dataset:
```
docker run -it nextstrain/nextclade:2.0.0-alpha.3-debian bash
root@4474d94696…
xzhub updated
2 years ago
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Currently data powering g.h map is updated 1x per day in the S3 bucket.
Can we increase the frequency of when the data powering the map is updated to the S3?
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- [x] Increase size of Figure 1
- [x] Harmonise fonts in all figures if not done already
- [x] Move Country up one column in Table 1
- [x] "% difference in cases compared to last week" in first ro…
Mougk updated
2 years ago
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Time series of case counts (cumulative and daily incidence, suspected and confirmed and by country)
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I'm getting the below response for random clustering requests
```
{"type": "UNHANDLED_ERROR', "message": "Unhandled internal exception.", "exception": "java.lang.ArrayIndexOutOfBoundsException", "…
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The last error I am seeing with Cecret is that vadr is terminating:
[e4/abdf4a] NOTE: Process `mpx:vadr (QC metrics)` terminated with an error exit status (255) -- Error is ignored
DrB-S updated
2 years ago
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Hi, long question on how would you compute the divergence tree/branch lengths from a (BEAST) timetree?
I found a way that works for MonkeyPox but I am not sure if it will stay correct with other d…