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It would be fantastic (for me, anyways), if Reprzip could wrap Singularity executions. Discussed in https://github.com/ViDA-NYU/reprozip/issues/294 is an issue in which singularity requires `suid` to …
gkiar updated
6 years ago
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https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=913781
> This package contains a scripts, which directly access the dpkg internal
database, instead of using one of the public interfaces provided…
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https://github.com/ViDA-NYU/reprozip/blob/86bb0cd9695f88782e45103bce4031121f1376b3/news.html#L338-L342
Previously fixed by e6256046 but now it all seems gone?
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Hi!
I am trying to minimize a neurodocker container using neurodocker reprozip.
My container uses fsl, freesurfer, and HCPworkbench.
I have a python script that takes a nifti file from the containe…
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thank you for the reprozip!
While exploring it more we ran into "input" files being not traced on my laptop (Debian sid/unstable with 4.15.0-1-amd64 kernel) while it worked just fine for @kyleam on h…
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Hi,
I'm trying to use reprozip to monitor a workflow of mine, but getting a non-very-descriptive error message below when doing this. I'm able to run simpler commands, such as `echo hello`, but my …
gkiar updated
6 years ago
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it is not available for anything but linux and thus now `pip install niceman` fails on osx
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For the new version of Ubuntu, the input/output files are not put down in input/output section of the config file.
PS - Also tested with digits-sklearn-opencv and digits-sklearn with the current vers…
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- [x] Instructions for:
- [x] Installing Clowdr
- [x] Downloading data
> aws s3 cp --no-sign-request --recursive s3://openneuro/ds000114/ds000114_R2.0.1/uncompressed/ ./
- [x] Running ex…
gkiar updated
6 years ago
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```
$ reprozip trace id
... works, creates a first run in config
$ reprozip trace /bin/doesnotexist
... doesn't work, exits with 127 but duplicates first run in the config
```
When running a n…