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An initial issue with ellipse_visualize seems fixable using:
-from demo.Lab0008.lab0008_visualize import ellipse_visualize …
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- DBSCAN [scikit-learn.org](https://scikit-learn.org/stable/modules/generated/sklearn.cluster.DBSCAN.html)
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I am doing clustering of about 50K locations. Each cluster should have about 20 or less locations. Unfortunately it takes about 1 hour to finish the algorithm. My initial guess says that repeated dist…
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Since there is no any document ready until now, It would be helpful to give us some tips and notes on how to select best parameters controling the final results. It seems the following are the most im…
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We are developing front-end software which use clustering algorithms as a small part of their infrastructure. Ideally we would like users to be able to use a plethora of different clustering algorithm…
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cannot import name 'getEmbeddings' from 'sentenceEmbedding' (/content/drive/My Drive/Iter-DBSCAN/sentenceEmbedding.py)
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Hi, after I submit the job in yarn-cluster mode, I met the problems as follows:
## 1. Failed: union at DistanceAnalyzer.scala:89
details:
java.lang.AbstractMethodError
at org.apache.spark.Logging…
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Is it possible to cluster a hash like `{:name => "Foo", :coords => [0,1]}`?
I'd like to keep track of who got assigned to what cluster and have multiple "names" that have the same "coords".
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Hello,
I am using poppunk 2.7.0 with pp-sketchlib v2.1.4.
I am having issues when running fit model:
poppunk --fit-model dbscan --ref-db TBdb --output TBdb_hdbscan
Output:
PopPUNK (POPu…
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Hello,
because the program does not find any clusters for my protein sequence with the standard clustering settings, I was trying to change some of the epsilon settings. The "--eps_val" flag seems to…