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Hello,
I would like to inquire about using your web-based microbiome analysis tool, "MiCloud".
When importing data on your website, four files were required: an OTU/ASV table, taxonomy, metadata…
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Dear dada2 enthusiasts,
I'm pretty new to dada2 so I would like to hear some opinions from those who are experts and use dada2 regularly about my issue analysis.
I have tried using filterAndTrim…
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Virulence genes are a signature of the microbiome in the colorectal tumor microenvironment - Michael B. Burns et al. - Genome Med
https://pubmed.ncbi.nlm.nih.gov/26170900/
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I came across the very long function name [`multiplicative_replacement`](https://scikit.bio/docs/dev/generated/skbio.stats.composition.multiplicative_replacement.html). Then I started to think if ther…
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Effects of removing in-feed antibiotics and zinc oxide on the taxonomy and functionality of the microbiota in post weaning pigs – Juan M. Ortiz Sanjuán – Animal Microbiome
https://animalmicrobiome.bi…
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Maternal microbiota communicates with the fetus through microbiota-derived extracellular vesicles – Anna Kaisanlaht – Microbiome
https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-02…
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Diagnosis of Crohn’s disease and ulcerative colitis using the microbiome - Kang _et al_ - PMC
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10640746/
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Bald sea urchin disease shifts the surface microbiome on purple sea urchins in an aquarium – Chloe G Shaw – Pathogens and Disease
https://academic.oup.com/femspd/article/doi/10.1093/femspd/ftad025/7…
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Dirichlet regression is possible in brms using the dirichlet family. But this requires that outcomes be non-zero.
Election outcomes are one case where outcomes are distributed according to the diri…
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Yearly variation coupled with social interactions shape the skin microbiome in free-ranging rhesus macaques – Christina E. Roche – Microbiology Spectrum
https://journals.asm.org/doi/10.1128/spectru…