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> /data/lirongzhen/SimpleFSRE/fewshot_re_kit/data_loader.py(503)__init__()
-> print("[ERROR] Data file does not exist!")
(Pdb) p path
'./data/5-1-test.json'
(Pdb) c
[ERROR] Data file does not exi…
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Already tested, this is place-holder for later versions
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Create BCOs for all new datasets
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1. Inconsistent metadata description across datasets -- where is the minimal level of description that all datasets should have?
2. metadata -- pulled from repository metadata but not all elements an…
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Loading a target correctly calls via https URL for one of the apo structures but via http for another.
- https correctly requested for Mpro-x2097 (standard dataset naming convention) =>
GET | …
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This is a bad bug. By default, Silo prevents object overwrites. However, you can disable this by calling DBSetOverwrite() with a non-zero arg. On PDB driver, this means object data is just re-written.…
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Ideally the output from `load_indices` would allow to both know
* Whether the index is an IvfPq index or a Btree index
* What parameters were used to train the index
Today I can kind of guess…
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I am trying to test this functionality in mongoengine:
http://docs.mongoengine.org/guide/text-indexes.html#ordering-by-text-score
When I run this function during a test I get:
```
File "/home/…
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On version 1.7.1 of d3r:
evaluation raised a KeyError and exited. See output below:
Running command: evaluate.py --pdbdb /data/pdb.extracted --dockdir /data/celpp/2017/dataset.week.13/stage.6.auto…
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Hi
I tested with my own .pdb file today, but a similar error appeared, which seems to be caused by the mapping problem between the database and the `pdb_metadata.csv` file.
The code1:
`python se…