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Are there any plans to port this to Python 3?
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MNE can do cluster-based permutation tests on 3D data, but from what I understand, it's fairly complicated and time-consuming to set up the connectivity matrix. Ideally, it would be super cool if we c…
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Dear Armand,
first of all, thank you for this impressive work, both the toolbox and the paper (and the thesis respectively).
I'd like to ask you what would happen if we turn off 'flag_tfce' option…
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I am using `spatio_temporal_cluster_1samp_test` with a dict `threshold` so as to perform a threshold free cluster enhancement (TFCE) on GeneralizationAcrossTime (GAT) matrices.
I want to test whether…
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The following warning will be displayed.
`usr/local/lib/python2.7/dist-packages/h5py/__init__.py:36: FutureWarning: Conversion of the second argument of issubdtype from float to np.floating is depr…
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I'm trying to plot a TF image (more specifically an ERDS map) with a significance mask. In other words, I would like to plot only significant t/f values, whereas not significant values should be white…
cbrnr updated
6 years ago
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After running a mincTFCE, trying to write out the t-values:
```R
> mincWriteVolume(VBM_gm_tfce,fileOut,"tvalue-groupAD")
/home/nistmni/src/minc-toolkit-v2/libminc/libsrc/netcdf_convenience.c:573 (f…
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Hey there,
I wanted to see with you if I'm missing something when running a spatio_temporal_cluster_test with tail=-1 and tfce thresholds.
It seems that with tail=-1, one must use negative star…
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I tried to pip install your package as suggested in the wiki:
`pip install -U tfce-mediation`
and I got a TabError:
```
Traceback (most recent call last):
File "setup.py", line 71, in
co…
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The TFCE script is syntactically compatible with python3 but won't run since it uses weave, which doesn't run on python3 (it's deprecated in favour of Cython).