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AlphaFamImpute, as all Alphatools who do phasing and imputation I guess, need a map file to recognize multiple chromosomes. I used the 1000 genomes extended dataset featuring around 600 trios added th…
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Thank you so much for maintaining this tool @lazappi !
I am currently updating my single cell overview slides and noticed an issue in the platforms barplot as the percentages do not sum up to 100% …
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I thought this was really interesting, but do you think this is really estimating a confidence interval? It strikes me it is simply estimating the spread in the training data. What do you think?
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Hey, i keep running into this error. I googled it up and looks like your code is fine. Hence makes me suspect pytorch might have changed something in the newer versions. do you remember what version o…
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Both `cov()` and `corrcoef()` accept a `ddof` parameter that allows the caller to tune the bias term. Would it make sense for `polyfit()` to do the same, when returning the covariance matrix?
I imag…
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In the current implementation of the polynomial class, the coefficients are stored using an Eigen matrix and not a vector.
If other types are used (such as linear_variable), the polynomial class will…
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I find it easier. But your emacs 80 character boundary may be preferred.
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ignore