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Hi, I am not sure how to implement the code you wrote with the sequence data. If I have a dataset of antibody sequences and their target sequences, how do I run this code on it ?
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Here are a set of new terms in OBO format for human IgA and IgD immunoglobulin protein complexes, 17 terms in all. The terms are linked to and modeled on the GO protein complexes for these immunoglob…
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Hi,
When using the likelihood functionality of AbLang, I'm noticing an upper limit of sequence length that it will still process (somewhere < 150 residues).
Breaking example:
```python
heavy_abl…
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hi,I have a problem about training with baseline methods. It says that "AttributeError: 'AbsDataset' object has no attribute 'raw_all_antibody_set_len'. " Hope you can add this module. Thank you.
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## *Repository Creation Request for Immunology Virtual Lab II* _Phase-2_
1. #### Coordinating Institute: Amrita Vishwa Vidyapeetham
2. #### Approver’s Name: Dr. Shyam Diwakar
3. #### Primar…
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Excellent work, and very thx for open source. This is my question.
If Using tools like Igfold or alphafold to predict antibody, then use this structure to initialize X. Of course for the [MASK] resid…
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# Conjecture—the maximimum possible neutralizing antibody titer | Nothing Is One Thing
This is the next in what is looking like a series of “Night Science” posts about how the immune system works, fr…
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![image](https://user-images.githubusercontent.com/52743133/64430308-4fa0aa00-d0b8-11e9-8ce8-09bd9f763e5d.png)
Hello,
I have separate reference images for the color pairs
- 488-405 (DAPI + 488 b…
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1. どんなもの?(Abstract, Conclusion)
本論文は、AbAdaptという抗体-抗原複合体の構造をが配列情報から予測する手法を提案した。この手法では、分子ドッキングと3Dモデリングを組み合わせた。また、直接配列を入力とし、立体構造を出力するパイプラインをサーバー上に構築した。
2. 先行研究と比べてどこがすごいの?(先行研究, どんな問題を解決した)
抗体と抗原の複合…