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# 生信爱好者周刊(第 51 期):
这里记录每周值得分享的生信相关内容,周日发布。
本杂志开源(GitHub: [[ShixiangWang/weekly](https://github.com/ShixiangWang/weekly/issues/%5Bhttps://github.com/ShixiangWang/weekly)]([https://github.com/Shix…
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Hi,
I noticed there is no documentation on the loss functions and what the inputs are etc. Is this available anywhere? Since the source code is not available it's difficult to understand from just…
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root - INFO - All Validation set: Loss 0.00198838 | AUC 0.97652 | AUPRC 0.338539
root - INFO - Predict by threshold: Precision 0.716505, Recall 0.196933, F 0.30895
root - INFO - Predict by topK:
ro…
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## 🐛 Bug
The [AUPRC](https://torchmetrics.readthedocs.io/en/stable/classification/average_precision.html?highlight=average_precisionv) metric supports the `sample_weights` argument, but it is [neve…
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Taking the average of ranks is advised against for biomedical image analysis competitions (https://doi.org/10.1038/s41467-018-07619-7). From the paper:
> According to bootstrapping experiments (Figs.…
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Hi, thank you IndoNLU team for making this indobert model. I'm currently working on thesis with this IndoBERT for BertForMultiLabelClassification Task.
I have successfully run the "finetune_casa.ip…
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Now the code works fine, there is no error any more. But the results of the experiment looks terrible to me. Is it a common issue (algorithm itself) or something wrong with my testing? ( I am also us…
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# HERA:
I have fixed the simulator such that the proper models of source, gain, fluctuations, cross talk and rfi are simulated. The generation script will need to be refactored and comitted to the re…
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The area under the Precision-Recall curve (AUPRC) is very useful metric for class imbalance. Here is the source (https://scikit-learn.org/stable/modules/generated/sklearn.metrics.average_precision_sco…
gm039 updated
2 years ago
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First of all, I am using
```
python 3.8.5
pycaret 2.2.3
scikit-learn 0.23.2
Win10 Pro
```
The `add_metric()` works fine on the built-in dataset as shown in below.
```
from pycaret.datasets…