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### Description
The aim is to **display a brain segmentation overlapped on a T1 MRI image** (both Nifti) using AMI.
The problem is that the **brain segmentation appears shifted from the T1**.
Howev…
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The example in
examples/tissue_classification.py
does not work e.g. on the following image:
nipy/data/neurospin/sulcal2000/nobias_ammon.nii.gz
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Thanks for the amazing project! My dataset is multiple classes segmentation. Mask image is (H, W), which H is height, W is width, each pixel is an integer representing the class. For example, tree: 0,…
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I let my laptop sit for a while and I returned with over 100 notifications, maybe 150. I clicked the notification panel so I could clear it, it hung for a moment then crashed.
When trying to start …
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```
This will decouple from the bounding box.
```
Original issue reported on code.google.com by `syrn...@gmail.com` on 8 May 2009 at 5:17
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![image](https://github.com/ali-vilab/Ranni/assets/64348681/5538f311-96a9-4e77-920f-93d725200dc5)
![image](https://github.com/ali-vilab/Ranni/assets/64348681/6f991b3c-ce47-436c-bf9c-f94019bc9dd0)
…
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![image](https://user-images.githubusercontent.com/25072109/96890471-aa7c9880-1455-11eb-943e-36ccbc997e07.png)
[subject1-session1.additional.log](https://github.com/BioMedIA/dhcp-structural-pipelin…
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Dear authors,
I'm currently trying to get your DeepSpineTool running on my computer (MacBook Pro, Apple Silicon). We're working on a quite related data set and I think your tool may be of great hel…
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# Description
## Data
- `nih-ms-mp2rage`
- `marseille-7T-iso-mp2rage`
- `marseille-7T-aniso-mp2rage`
As discussed [here](https://github.com/ivadomed/model_seg_ms_mp2rage/issues/75#issuec…
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Hi, can I get segmentation of the AI2-THOR environment as top down images?
I do get segmentation when I use "ToggleMapView" but the segmentation does not match the RGB image.
Any help would be gre…