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### Description of feature
I'm noticing a lot of multi-mapping reads and those unmapped as 'too short'. Some of this is just down to the short read lengths I guess, but we should try to add some ST…
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I used "trinotate_report_summary.pl" to generate a "cXp_summary.html" file, however, this html file shows up blank when opened in Google Chrome or Firefox.
Why?
and, here are the contents of the…
ljyls updated
3 years ago
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Dear Zebulun,
I am trying to learn how to use fagin with the yeast dataset. However, after download the data, running ```make run-yeast``` resulted in error message. Is there a vignette for running t…
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When simulations break right after a new generation initialized, they leave behind a `out/[simOutDir]/[variant]/[seed]/generation_######/` directory which contains a `000000/simOut/shell.log` output t…
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Issue linked to #76 and testing the `riboviz.tools.upgrade_config_file` tool from riboviz 2.1.
I used the command `python -m riboviz.tools.upgrade_config_file -i ../example-datasets/fungi/saccharom…
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Creating this thread to post potentially useful info about _Bacillus subtilis_ that people come across.
Quick background: _Bacillus subtilis_ is a bacterium that is widely used in industrial biotec…
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In order to make the database schema more universal and less MX specific, I'd like to propose the following set of changes:
Proposed solution v1.0
--------------------------------
Rename these th…
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following from
https://github.com/geneontology/go-ontology/issues/21126
should 'condensed chromosome'
merge with 'chromosome'
( condensed chromosome is a stage specific form would be
chromoso…
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* **Term to be merged: Provide GO ID and term label**
cap-dependent translational initiation
GO:0002191
* **Which term do you propose this term merge into? Provide GO ID and term label**
cytopla…
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### Version
all versions including latest git master
### Operating system type + version
Linux
### Behavior
Generation of support material especialy for two extruder setup may take very long ti…