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## Description
Using CellRank with pyGPCCA on an [Arabidopsis single-cell dataset](https://academic.oup.com/jxb/advance-article/doi/10.1093/jxb/erab228/6279507), the threshold determining if values…
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Hi,
While wokring with the FSST command, I found that taking the square root of large matrices (over 1000x1000) can be a bottle neck. I found that using sqrtm function from the package pracma work…
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## Description
The WOT transition matrix is only block sparse slowing things down e.g. the Schur decomposition in GPCCA. It seems that many transition probabilities are pretty small s.t. we could o…
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Hi Jaromir,
I would appreciate your response to a related question: To your knowledge, is IRIS currently able to generate a symbolic representation of either the state-space formulation of a given …
frnix updated
3 years ago
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In response to the positive feedback I got from sharing the previous batch of extension methods I wrote to work with Multik, I thought I'd share another batch of such methods I wrote for Multik, in or…
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Higham and Deadman have published a [list of software](http://eprints.ma.man.ac.uk/2102/) implementing algorithms for matrix functions, showing that Julia's library for these functions could be improv…
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The following simple example fails with error `Symmetric QR failed to converge`:
```c
#include
int main() {
Ceed ceed;
CeedInit("/cpu/self/ref", &ceed);
double A[9] = {
1, 0, 0,
…
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I encountered a problem with Lapack library. As a maintainer of scipy library
in Fedora I noticed that test suite of scipy fails on Schur decomposition.
I found out that from version 3.10 of Lapac…
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In master, the documentation for `cupy.linalg.matrix_power()` states that "M must be of dtype float32 or float64.". However, the function is only implemented using `cupy.linalg.matmul()` which does su…