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tangerzhang/ALLHiC
#2
Allele.ctg.table format ?
How to create Allele.ctg.table file ? ``` ➜ ALLHiC_assembly ~/Tools/ALLHiC/bin/ALLHiC_prune -i Allele.ctg.table -b sample.clean.bam -r A_and_B.fa Cannot open Allele.ctg.table ```
jnarayan81
updated
5 years ago
1
tangerzhang/ALLHiC
#1
Cannot open bamfile `sample.clean.bam` (sam: reference alrea…
I was using ALLHiC to deal with a haploid genome. Thus I skip the prune step, but when I run the ALLHiC_partition cmd, I got this error.
DieTANG
updated
6 years ago
2
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