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I have been working with Polyfun quite a bit recently and generally everything has run quite smoothly and I greatly appreciate this amazing tool.
Unfortunately, when switching over to using non-UKB…
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I have a problem with positions > 2Gbp in my .map file.
For every marker with a position> 2Gbp I get the following error when trying to do anything involving the .map file:
Error: Invalid bp coord…
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hi, I follow the manuscipt to calculate the gene scores:
but a few genes (about 18…
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I don't know if I'm the only one having this issue but I recently tried to run ldscore regression using the PolyFun package and I got this error
```
Traceback (most recent call last):
File "lds…
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helllo， there are no gene scores for healty tissue, which is shown in your supplementary tables:
celltypes | traits | Escore | pEscore
-- | -- | -- | --
Bcells (1.0%) (Healthy) | …
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Hello,
The results of your article are very useful for my research, which is mentioned the this ReadMe.txt:
https://storage.googleapis.com/broad-alkesgroup-public/LDSCORE/Jagadeesh_Dey_sclinker/RE…
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@kkdey Thank you for uploading the resources and codes online. It is extremely helpful.
I have a question about the LDSC annotations uploaded. Here is the link for an example:
https://alkesgroup.b…
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helllo， there are no gene scores for healty tissue, which is shown in your supplementary tables:
celltypes | traits | Escore | pEscore
-- | -- | -- | --
Bcells (1.0%) (Healthy) | …
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Hi,
Congratulations on the preprint and many thanks for making this available. I am wondering how to implement this code with the data used in the paper. The datasets seem to be available at https…
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Hi, I try to run the demo, but it reports the errors:
```
ERROR: Unable to locate a modulefile for 'gcc/6.2.0'
ERROR: Unable to locate a modulefile for 'R'
```
Best