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There's so much fascinating work in this repo, really amazing stuff! It got me thinking about options for Bayesian inference with these data, and here's my attempt at a workflow using the RevBayes pro…
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Can we draw some knowledge we already know from other fields of study to better understand connectomics? I was thinking maybe the operations research that was going on during the world wars might be h…
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Embedding Guile Scheme
M
gnu guile snarf
Edit
I'm afraid I don't have enough context to fully understand your query "gnu guile snarf". However, let me provide some potentially relevant informatio…
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combine Kalman Filter from dynamax and sequential monte carlo from [Blackjax](https://github.com/blackjax-devs/blackjax) to implement RBPF for switching linear Gaussian SSM. For details, see sec 13.4.…
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### Issue Description
Pyro gives me a deep positive impression when implementing HMM. But I wonder whether updating the number of hidden states can be supported.
How to determine the number of hidde…
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Hi @taylorreiter,
Thanks for the nice write-up explaining your pipeline! As you point out, this is an off-label use of salmon, and so I can't say we've tested this functionality before. However…
rob-p updated
4 years ago
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The output from the alanine dipeptide test looks pretty awful.
![alanine_its_0](https://cloud.githubusercontent.com/assets/3656088/17827686/26563042-664f-11e6-8db6-0d577a414e5a.png)
![alanine_its_1](h…
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See https://github.com/probml/JSL/blob/main/jsl/hmm/sparse_lib.py for an older implementation.
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Suggestion: add a 3rd example to [tfp.mcmc.HamiltonianMonteCarlo](https://www.tensorflow.org/probability/api_docs/python/tfp/mcmc/HamiltonianMonteCarlo) showing how to infer the posterior parameters o…
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The 'At-A-Glance' (AAG) idea refers to a set of 4-5 edge properties that provide a high level EPC summary, allowing users to make a first pass assessment of confidence and relevance for a given KG Edg…