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Hello vg team
It is amazing the work you are doing.
I am relatively new to using vg and I would appreciate a little help with my question please.
I want to download an already constructed human pa…
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The idea is that instead of having a few different temperature targets on a graph that is going from 0°C to max °C.
You could rather have it show the target temperature as 1.0 and vary the scale t…
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**1. What were you trying to do?**
I was trying to extract a subregion from a graph encoded in a GFA format file.
**2. What did you want to happen?**
I want to obtain a GFA format file with the g…
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Hi,
I'm trying to call variation from a flat vg graph using PacBio ccs reads, but the vg call fails:
> Reading input graph
> Computing augmented graph
> terminate called after throwing an instan…
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Many thanks for releasing the code. I have some questions regarding the GraphVAE.
- It seems that the encoder is not using the graph neural network, the GCN layers are commented at lines 113-118 of…
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Hi all, thanks for the phenomenal library. We're already using it in several statistical genetics methods in my group!
I've been porting over some older code of mine to use optimistix, rather than …
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when I run python variation_bbs_with_target_graph_segments_suppl.py , I got error.
$ python variation_bbs_with_target_graph_segments_suppl.py
Namespace(batch_size=1, channels=1, exp_folder='exp',…
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Keep things super simple and do end-to-end profing: Profile running a benchmark binary that internally has a bunch of test cases. This way we can integrate results from all benchmarks in the same way …
Wumpf updated
6 months ago
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This is a huge undertaking, and probably needs at least:
- graph panel, legend item
- preview rendering
- `legend` plugin.
My fantasy would be a legend that showed all 'panel' attributes of both edge…
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## *Repository Creation Request*
Use this to get your experiment repository created or updated on GitHub under Virtual Labs organization.
1. #### Coordinating Institute: IIIT Hyderabad
2. #### …