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@mastrof, maybe we can discuss what you commented in this post: https://github.com/JuliaDynamics/Agents.jl/issues/884#issuecomment-1732556853
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Hi, can we please request the following four terms to be created:
Occurrence probability of Dinophysis acuminata (ITIS: 302: WoRMS 109603) in the waterbody
Occurrence probability of Dinophysis ac…
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Simulated Solute Tempering, 2009
Robert Denschlag, Martin Lingenheil, Paul Tavan, and Gerald Mathias*
https://pubs.acs.org/doi/10.1021/ct900274n
Molecular Simulations of Mixed Lipid Bilayers with…
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Recently, I launched a 1.2 Million Atom simulation and it works stably! There is a performance hit which isn't surprising (benchmark numbers are from 1 nanosecond simulations on CUDA):
- 4070 Ti get…
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The authors present an implementation for a numerical solver specifically design to tackle continuum electrostatics models. Specifically, the authors present a solver for the Poisson-Boltzmann equatio…
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Hi, I would like to use your package for the analysis of RRBS data. First of all, do you think it is appropiate to use Mathylinheritance with RRBS data or should it be only fro WGBS? Can or should I m…
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There seems to be some interest in having support for DPD. Most likely we would want to use the method described in http://arxiv.org/abs/cond-mat/0602523. It would involve writing a new Integrator t…
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Hello, respected developer. I have two questions. The first one is that I want to transplant the neural network computation of C302 to my neural morphology chip. However, currently my neural morpholog…
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@jmdetloff here's some starting points
## Goal
A UI which enables users to quickly simulate models under alternate conditions (e.g., knockout a gene, change the initiation concentration of a drug,…
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According to Polychrom documentation, the timestep of simulation is always fs scale (`integrator="langevin"`). But I need simulation in ms scale to fit experiment data, just setting timestep=1e12 fs w…