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We have rake tasks that installs that symlinks for plugins when such plugins are installed or updated, in:
[cbrain_plugins.rake](https://github.com/aces/cbrain/blob/master/BrainPortal/lib/tasks/cbr…
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### Title
ChRIS Research Integration Service
### Short description and the goals for the OHBM BrainHack
ChRIS is a platform for making reproducible, container-based analysis easy to develop …
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I know this feature is not yet merged, but here are some thoughts about improvements to it.
- [x] rename the environment variable that Travis use to identify the docker image; instead of `IMAGE_NAM…
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When running GICA, FSL_melodic fails if the input files have different dimensions (e.g. different number of slices). [Expected behavior]
The error logs print every file name and the dimensions, and i…
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In commit https://github.com/aces/cbrain/commit/6030bf1b8bc2f02c56299b6c6b8727867a4ecb0c I added two new
helper methods, `page_is?()` and `page_is_not?()`. See their description for more info.
I h…
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In CBRAIN-Melodic interface, there has to be an option to register to "expanded functional Image"
The input files will be presented in a .CSV file.
Each column of the file will correspond to
Column …
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Apparently with laggy file systems some workers will be detected as crashed when they are not. Maybe send kill messages, with unique file names, such that there won't be several active workers at the …
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Split this to two issues, since they are definitely separate problems, but this is the follow-up to #28
Our HPC has `nextflow` so I tried:
```
nextflow run /groups/adamraikes/git_repos/dmriqc_…
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Some DPs are meant to be read-only. Usually, they inform the rest of the system by just overriding the method read_only() in this way:
```ruby
def read_only
true
end
```
The attribute rea…
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Hello,
I am attempting to use the `datalad-nda` CLI in order to produce a datalad dataset based on the 09 2020 3165 ABCD release found on NDA. I have the manifest as an uncompressed text file, so I…