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Nice work!
1. I liked how you put r code into the text. You might play around with the formatting options in the `format` and `round` commands so that you don't have so many significant digits.
2. You…
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External workflows, e.g. the once from the training material, should be updated regularly. Or even better should be a linked against the training material. Maybe we can pull them down before running t…
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We could publish in either of these three journals
- [Frontiers in Plant Science](https://www.frontiersin.org/journals/plant-science)
- [Plant Physiology](http://www.plantphysiol.org/)
- [Plant Met…
Thyra updated
3 years ago
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# Shaping a European prediction service for biological data
# Abstract
We developed DLOmix-serving, an open-source and modular machine learning (ML) inference server for biological data based on…
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Create a section for each environment that helps a user transition to using the tool/environment in AnVIL
┆Issue is synchronized with this [Jira Story](https://ucsc-cgl.atlassian.net/browse/ANVIL-8…
kozbo updated
4 years ago
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Peptides FDRs do not correspond to protein FDRs.
Currently, large-scale studies often have dozens or hundreds of LC-MS runs that are being accumulated. Repeated measurements lead to an accumulation o…
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Hi, great tool!
To make it even better, it would be nice to also support protein level result export to .txt/.tsv, as is implemented for the peptide level table.
at least pFind.protein cannot read…
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# Title
Rusteomics
# Abstract
The proteomics community created some exceptional toolboxes over the past years, like OpenMS, Pyteomics or mzR. Most of these toolboxes implement general computa…
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Thanks for providing curated templates for data analysis! For a project, I am trying to create a general template for computational analyses. Re templates
RNASeq computational analysis v. 1.2.0
Pr…