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Hello, I wanted to use DeepD3 to label spines and extract information about their size and the roi is from which z plane...
I want the club all the rois for the same spine together to get their volu…
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Please check that the term does not already exist by using the ontology search tool OLS:
https://www.ebi.ac.uk/ols4/ontologies/cl
**cell label:**
spiny VIP neuron
**Text definition:**
A vip G…
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So according to the paper a line graphs are essentially graphs where vertices and edges have been reversed. Was this switch necessary to access graph error in the i2g paper? Was their explanation bas…
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I have a parsing error in my ntriple input file of more than 200 millions triples.
Here is the message:
```
echo '{ "ascii-prefixes-only": false, "num-triples-per-batch": 10000 }' > flymine-obj…
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**Description**
I am attempting to train a model using my own 2D dataset with DeepD3, but the training process hangs when following instructions provided in `Training DeepD3 model.ipynb`, and it se…
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>If this is a request for a new term, please provide us with the following information.
>1. Preferred term label (e.g., asplenia)
decreased dendrite branch number
>2. Synonyms (e.g., absent …
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According to [Wikipedia](https://en.wikipedia.org/wiki/Dendritic_spine#:~:text=Spines%20are%20found%20on%20the,1%20%CE%BCm%20stretch%20of%20dendrite.), dendritic spines occur at a density of up to 5 s…
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Cf. "Mechanism of signal spreading" in "Biophysics of Biochemical Signaling in Dendritic Spines: Implications in Synaptic Plasticity" by Yasuda (2017) https://doi.org/10.1016/j.bpj.2017.07.029.
"Ax…
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In order to conduct experiments on long-term learning and structural development of the brain
Arbor should support dynamic connectivity.
We would need to wire new synapses (not Gap Junctions for n…
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**Preferred term label:**
Decreased dendritic spine number
**Synonyms**
**Definition (free text, please give PubMed ID)**
Reduction in the amount of spines on a given dendrite.
PMID:804646…