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Hi,
I just started using the new `html_document2` style and noticed a couple of things. The figures are smaller than in `BiocStyle::html_document` and `rmarkdown::html_document`. I see at https://g…
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Hi!
While installing a large number of packages from both CRAN and Bioconductor on a container running the `docker.io/rocker/r2u` image, I got some of the Bioconductor dependencies from source. I c…
aitap updated
6 months ago
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Hello,
I am using spotclean to correct bleeding effect with 'spotclean' function.
However, I am facing error message.
```
spotclean(OC_obj)
Error in optim(x_init, .fn_optim, .gr_optim, m…
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Hello there
I'm trying to replicate what you did in your paper on the mouse pituitary: I would like to construct a custom annotation of the pituitary rat transcriptom as I notice that I have the same…
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https://mp.weixin.qq.com/s/twrBE7bxNxI2kvpI4G9G8Q
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https://mp.weixin.qq.com/s/twrBE7bxNxI2kvpI4G9G8Q
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I am using regionReport to create a report from my defined regions in the cattle genome (no annotation provided):
```
report
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* Similar to #9
* Import `num.sv` https://github.com/LieberInstitute/DeDHed/blob/53103928435e2fdade736de338d52bb08cc3ec36/R/k_qsvs.R#L11.
* Use the `assayname` argument like at #10.
* Check that …
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Using the GH actions setup (and some customization based on packages, etc) supplied by {biocthis} and running, I expected mostly similar output as what is observed on the Bioconductor build reports fo…
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will need help making the data in `data/` available to the package so that the examples work.