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We need to represent the workflow of synthesis orders progressing from decided to placed at Twist to succeeded/failed/abandoned/etc. to actually available at FreeGenes.
I think this can be done wit…
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We currently use an algorithm to allow for a user to provide a sequence and then query the API for parts, cache the query, find all forward/reverse part sequences in the query sequence, and then use a…
vsoch updated
4 years ago
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Example: We have genbank files from FreeGenes collections that needed to be modified because of issues cited in #278. Since these modified versions are now local versions in the package directory, it …
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We would like to increase the number of colors that are available for bio-printing. This version should add at least one more color to the existing 5 E.coli-based colors (in addition to the 2 wild-typ…
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Create pSB1K3, pSB1A3 (and others) as linear fragments
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As discussed in https://github.com/vsoch/freegenes/issues/113, since there are no naming conventions for various objects (aside from tags) we can't easily parse a search query to do something like rem…
vsoch updated
4 years ago
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This is a new feature request to add biosafety levels and terms for distributions, first discussed in #160. Specifically, for the first page of search results (for general items) the following should …
vsoch updated
4 years ago
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We need to decide what type of version numbers should be given to iGEM distributions.
In my view, there is a critical decision fork between year-based releases and semantic versioning.
- [Seman…
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- [ ] We can store sequences in the database as TextFields (postgres uses something called [TOAST](https://www.postgresql.org/docs/9.5/storage-toast.html) for compression so it's not an issue to stor…
vsoch updated
4 years ago
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Add package with parts (CDSs, UTRS, SPs, etc.) for plants